Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952874.1_cds_XP_016492314.1_82539
CDS Infomation

[gene=LOC107811836] [db_xref=GeneID:107811836] [protein=ankyrin repeat protein SKIP35-like] [protein_id=XP_016492314.1] [location=complement(join(1652..2458,6519..6951,7631..8256))] [gbkey=CDS]
Sequence

ATGGAAGAAGACAGAATAGAAAGTGGGATCAAGATTAATACAGAAGAGTCTCAGTGTTTT
GAGATGGAAGTGGAATCTTGTGAGACTGGAATACCTGGTTTGAGCAATGAGAATGGTGAA
GGAAGCCATGGAAATGTGGTATTTTCGAGAGAATCTCCGCTTGTAAGTAAAGACTTTAGA
TCATCTGCTATAGTTGGGGGAGGAGGAGGGTGTAATTGTGGAGTTAATAAACTTAAAGCC
AGATTGTCTAGTTCAGACTGTGAGGTTGGGAAAAATGAGAAATCGGGGCATGAGAAGAAG
CTTAATAGACAAGAGAGGATCGAGTTAGGGCGATTGTTTCAGGGTGCTGTGAGTTGCCAT
GACTGGGAGCTCGCCGAGAGTTTGATTCTACTGGCGGATCCCCTGACTCTGAATGATGCA
TTGTGCATTGCTTTAGATTCGATATGGTTTTTAAGTACACAAGAAGAGTTATATGGGATA
ACAGGGTTGATTAAGAAGATCATTTCTAATGGTGCCTTTGATTTCACTCGGGCAGCCCTA
AGGACTTCATTTCTTGCTTCTTGTGTTTCTGCTTGCCAGAGTCGAACTATGAGCCTCGCG
GATACCGTGACTGTAATGGCACAAAGGTTGCATGAACGACTTCAAGAGTGCAATGGGGAT
GAAGTTTTGAAGGCAGAAGCTGGTGCTAAGGTTCAGAAGTTCACTGAATGGGCTCTTAAA
TGTATTGGTTTCCATTCCCGCTGCCAAGGGAACAGGGATAAAGTTGGGCATAATGCTGCT
GTTGAAATACAACTACAGTTGTCGGCTTTCAAGACTTTCCTTGATCTTGCTGGGAACCAC
CTTACAGGAAAGGATTTCACGGAAGCATTTGATGCAGCTTGCTTCCCGCTTACGCTCTTC
TCTAGTTCGTTTGATCCGGGCTGGGCATCGGGTATTTCAGCTACGGCAATCCAAGGACTG
CTTGGCATGTTGGTGGAGGGCGGTGCGGACAATGTCAACCAATGCTTTCTTGAAGCATCT
CGTTTTGGGAGCACTGAGCTTGTCCGCATTCTTCTCCAGATTGCTCAAAGGAATAGCTTG
GACGTTGATGTCGACTTGGCTCTGGGATTTGCCTCCCATTATGGTAAAATTGGAACTATG
GAATGTCTAGTGGAAGAAGGGAATGCGATGGCTTTCTTGGGACCTTTGATGAGAGCTGCT
GAAAGGGGCTGCATTCAGGTAGTTGACTGGTTTGTTAAAAGAGGTTGCAGAGACATGGAA
CTATGTCTCGCCCTCACAGCTGCTACCTCCAGTAGTCAGGTTGAAGTTGCCGAATATCTC
CTTCCTCACGTTCCTCAGCATGTTCTTGCTGCCCTAAGTATCGAGATTCTTAAGGCTGCT
GGTGAAAGAAGTGGCGGATCTCTCGATGGTGTAGCATTTCTCCTAAGTTCAGATTTCCTT
GGTGATCCAGCTGCAACTTATGCGGTCGCCGACAGCATCGCTAAGTCGGATGACGAGGCT
GTCGCTCCTGAGCTCAGGTCTTTCCTTCGGGAGCATTGGTCGGAAGCTGCTTTCTCAGAC
GGGCTTAGGCAAGGACAAGAACACTACTTGAATATCGTGCGTATTTTGAAATGGGGGGAA
TCTCCCGTGTGTTTGGCGGATCTTCCCGGGCCCTTGAGAGTAGCAATAGCATACCTGCCG
CTGTATAGGGAATGTGTCAAGGCAGGGGGTTGCTTGTTATCACAAAGGCTTAGGGGGCAG
CTCGTGGAAGCAGCGAAAAGGCTTGACGGCGTCGTGTTGGAAGAGGTAAACCAGGGAAGA
GAATTATTGGCTGTTTTGGAGCATCATATTCCCCCATTTTTGGTAAATGCATCCAATGGT
GCTTAG

Peptide Sequence

PEP ID

XP_016492314.1
PEP Infomation

PREDICTED: ankyrin repeat protein SKIP35-like [Nicotiana tabacum]
Sequence

MEEDRIESGIKINTEESQCFEMEVESCETGIPGLSNENGEGSHGNVVFSRESPLVSKDFR
SSAIVGGGGGCNCGVNKLKARLSSSDCEVGKNEKSGHEKKLNRQERIELGRLFQGAVSCH
DWELAESLILLADPLTLNDALCIALDSIWFLSTQEELYGITGLIKKIISNGAFDFTRAAL
RTSFLASCVSACQSRTMSLADTVTVMAQRLHERLQECNGDEVLKAEAGAKVQKFTEWALK
CIGFHSRCQGNRDKVGHNAAVEIQLQLSAFKTFLDLAGNHLTGKDFTEAFDAACFPLTLF
SSSFDPGWASGISATAIQGLLGMLVEGGADNVNQCFLEASRFGSTELVRILLQIAQRNSL
DVDVDLALGFASHYGKIGTMECLVEEGNAMAFLGPLMRAAERGCIQVVDWFVKRGCRDME
LCLALTAATSSSQVEVAEYLLPHVPQHVLAALSIEILKAAGERSGGSLDGVAFLLSSDFL
GDPAATYAVADSIAKSDDEAVAPELRSFLREHWSEAAFSDGLRQGQEHYLNIVRILKWGE
SPVCLADLPGPLRVAIAYLPLYRECVKAGGCLLSQRLRGQLVEAAKRLDGVVLEEVNQGR
ELLAVLEHHIPPFLVNASNGA

Transcript Sequence

Gene sequence data has not been registered.